BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F06SP1|AL429929
(372 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 589 e-168
>3x_Contig1800
Length = 38778
Score = 589 bits (294), Expect = e-168
Identities = 349/370 (94%), Gaps = 1/370 (0%)
Strand = Plus / Minus
Query: 4 gttgccgtgtagaaaraagaagcaggtgtacaaaaggcaggtcatgaaattgcctggggc 63
|||||||||| |||| | || || ||||| | ||||||||||||||||||||||||||||
Sbjct: 6312 gttgccgtgttgaaagatgatgctggtgttctaaaggcaggtcatgaaattgcctggggc 6253
Query: 64 caarcagaacwtccawtgaaggaacccgaataagtgacagagacagcagaaaaagcagcg 123
||| | |||| |||| |||||| |||||| | || |||||||||||||||||||| |||
Sbjct: 6252 caagctgaacttccattgaaggtacccgattttgttacagagacagcagaaaaagctgcg 6193
Query: 124 aagakcaacgacggaaaacgttatgtctcagttgaatccagtggattgcattttatcttg 183
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6192 aagatcaacgacggtaaacgttatgtctcagttgaatccagtggattgcattttatcttg 6133
Query: 184 gacaaattgttggg-taaaattgaaagcctaaaggtcaagggtaaggaaatttccagcaa 242
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6132 gacaaattgttggggtaaaattgaaagcctaaaggtcaagggtaaggaaatttccagcaa 6073
Query: 243 gtttgagggttcttcaatcactttctggagacctccaacgaataatgatgaacctaggga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6072 gtttgagggttcttcaatcactttctggagacctccaacgaataatgatgaacctaggga 6013
Query: 303 ctttaagaactggaagaagtacaatattgatttaatgaagcmaaacatccatggagtgag 362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6012 ctttaagaactggaagaagtacaatattgatttaatgaagcaaaacatccatggagtgag 5953
Query: 363 tgtcgaaaaa 372
||||||||||
Sbjct: 5952 tgtcgaaaaa 5943
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2322
Number of Sequences: 1807
Number of extensions: 2322
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 372
length of database: 10,358,551
effective HSP length: 15
effective length of query: 357
effective length of database: 10,331,446
effective search space: 3688326222
effective search space used: 3688326222
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 49 (98.7 bits)